Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015856194.1_cds_XP_016513067.1_25646
CDS Infomation	[gene=LOC107830098] [db_xref=GeneID:107830098] [protein=probable linoleate 9S-lipoxygenase 5] [protein_id=XP_016513067.1] [location=complement(join(3258..4011,4111..4374,4475..4779,4866..4973,5156..5241,5340..5666,5778..6018,6132..6409,6696..6867))] [gbkey=CDS]
Sequence	ATGGCATCAATTAGTAAACTTGAAAATAAAAAAATCAATGGCACTGTTGTACTGATTAAA AAGAGACCTTTAGACATTGCTCCATCTGAAGTTGTTCAACAGCAGGCTGTTTATGAGATT CTTGGGCATAAGGTCACCCTGCAGCTTATCAGTTCTTTTACTGGAGATTCAGGGAAAGAA ATGAAAGAGAAACTTGGGAACCCTACACACTTGAGAGATGAGAATAACTCAGGCAATGAA TCAAAGTTTAATGTCACATTTGATTGGGATGAAGAAGTTGGAGCTCCAGGAGCATTCATT ATCAAGAACTTTAATCCTAGTGAGTTCTTCCTCAAGAAACTGACTCTTGAAGTTGATGAT CCAAGTCATGACAGCATACATTTTGTCTGCAATTCTTGGGTTTATCCAGCTGAAAAGTAC AAATCAGACCGCGTTTTCTTTGTCAATCAGGCTTGGCTTCCAAGTGAAACTCCAGCACCG TTACGTTGGTATAGGGAAGAAGAGTTGCTGAACTTGAGAGGAAATGGAACTGGTAAGCTT GAGGAGTGGGATAGAGTTTATGACTATGCTTATTACAATGACCTTGGAGATCCAGAAAAG GGTTCGGATTATGTTAGGCCAATCCTAGGAGGATCTGAAAAGTATCCTTATCCGCGTAGA GGCAGAACCGGGAGACCACCAACCAAGACAGATCCTAATTCGGAGAGCCGGCTGCCACTG CTAATGAGCTTTGGTATTTATGTTCCAAGGGATGAGAAATTTGCACCCCTAAAGATGACA GATTTTGTCGGTATAGCACTTAAGGTCATCGTTCAGCTCCTTGTTCCTGAGCTCGAGTCT TTAGCAAACATCAGCCTCAATGAGTTCAACAGCTTTGAAGAGATATTAAAAATCTATGAA GAAGGAATCAATCTTCCAAATGATCTTTTGGAGAGAAGTACTACACATATGCTCAAGGAA TTTATTCAAAGTGCTGGTCAGGGGTTTCTTAAGTATCCAATGCCACAGGTTATTAAAGAG GATAAGTCAGCTTGGAGGACTGATGAAGAATTTGCAAGAGAGATGTTGGCTGGAATAAAC CCTGTTTGCATTTGTGCCCTTAAGGAGTTCCCTCCAACTAGTAAGCTGGACCCAAAAGTC TATGGTGACCAAACTTGCAAAATAACCAGAGAACAAATACAAAATCAGTTAGATGGACTC ATTATAGAAGAGGCGATCAAGGCGAATCAGCTTTTCATATTAGATCATCATGACACAATT ATGCCATATGTGAGGCAGATCAATATGACAAGTACAAAAATTTATTCCTCAAGAACGATC CTTTTTCTACGGAAAGATGGGACTTTGAAGCCACTAGCCATTGAACTAAGCTTGCCTCAT CCAGATGGAGATCAACTTGGTGCCATAAGCGAAGTTTTTACACCACATGAAGATGGCATT GAGGCTTCCGTATGGCAATTGGCTAAAGCTTATGTCGCAGTCAATGACTCTGGAGTTCAT CAGCTAATCAGCCACTGGTTACACACTCATGCTGCAATTGAGCCATTTGTGATCGCGACA AACAGGCAGCTAAGTGTGCTTCATCCTATCTATAAGCTTTTGCATCCTCACTTCCGTGAT ACAATGCACATTAATGCCTTGGCTAGACAGACCCTACTTAATGCTGGAGGAATTCTTGAG CAAACAGTTTTCCCTACAAAATATGCTATGGAGATGACATCAGTAGCTTACAAGGATTGG ACTTTTCCTGATCAAGCCCTTCCCGCTGATCTTATCAAGAGAGGTGTGGCAATTGAGGAT CCTGAATCGGAACAAGGTATCCGCCTACTAATTGAGGACTATCCATATGCTGTGGACGGT CTAGAAATATGGTCAGCAATCAAAAGTTGGGTTCAGGAGTATTGCAGCTACTATTACAAA ACAGATGACATGATTAAGAAAGACACTGAACTTCAAGCCTGGTGGAAGGAAGTCCGAGAA GATGGACATGGCGACAGGAAATCTGAGCCCTGGTGGCCTAAAATGCAAACGCTCAAAGAG CTGATTGACTCATGCAATATAATTATCTGGATTGCTTCTGCTCTTCATGCAGCAATCAAT TTTGGGCAGTATCCTTATGGTGGCTACCTACCAAATCGCCCTTCAATGAGCCGAAGGTTC ATGCCTGAGCCAGGCAGTCCTGAGTATGAAGATCTGAAGACGAACCCTGAAAAGGGATAT CTGAGGACAATTACACCCCAACTACAGACTCTAATTGGAATTTCTGCTATTGAGATTTTG TCGATACATTCTTCAGATGAAATTTACCTTGGCCAGAGAGACACTCCTGAGTGGACTAAG GACAAAGAACCATTACAAGCTTTAAAAAGATTCGGCAAAAAGCTGGCTGAAATTGAGGAA AAAATTATGAAGATGAACAATGACACAAAATTGAAGAACAGGATCGGGCCTGTTAAGATG CCATATACATTGCTCTATCCTACAAGTGAACCAGGACTTACTGGTAAAGGAATACCCAAC AGTGTCTCAATATAA

Peptide Sequence

PEP ID	XP_016513067.1
PEP Infomation	PREDICTED: probable linoleate 9S-lipoxygenase 5 [Nicotiana tabacum]
Sequence	MASISKLENKKINGTVVLIKKRPLDIAPSEVVQQQAVYEILGHKVTLQLISSFTGDSGKE MKEKLGNPTHLRDENNSGNESKFNVTFDWDEEVGAPGAFIIKNFNPSEFFLKKLTLEVDD PSHDSIHFVCNSWVYPAEKYKSDRVFFVNQAWLPSETPAPLRWYREEELLNLRGNGTGKL EEWDRVYDYAYYNDLGDPEKGSDYVRPILGGSEKYPYPRRGRTGRPPTKTDPNSESRLPL LMSFGIYVPRDEKFAPLKMTDFVGIALKVIVQLLVPELESLANISLNEFNSFEEILKIYE EGINLPNDLLERSTTHMLKEFIQSAGQGFLKYPMPQVIKEDKSAWRTDEEFAREMLAGIN PVCICALKEFPPTSKLDPKVYGDQTCKITREQIQNQLDGLIIEEAIKANQLFILDHHDTI MPYVRQINMTSTKIYSSRTILFLRKDGTLKPLAIELSLPHPDGDQLGAISEVFTPHEDGI EASVWQLAKAYVAVNDSGVHQLISHWLHTHAAIEPFVIATNRQLSVLHPIYKLLHPHFRD TMHINALARQTLLNAGGILEQTVFPTKYAMEMTSVAYKDWTFPDQALPADLIKRGVAIED PESEQGIRLLIEDYPYAVDGLEIWSAIKSWVQEYCSYYYKTDDMIKKDTELQAWWKEVRE DGHGDRKSEPWWPKMQTLKELIDSCNIIIWIASALHAAINFGQYPYGGYLPNRPSMSRRF MPEPGSPEYEDLKTNPEKGYLRTITPQLQTLIGISAIEILSIHSSDEIYLGQRDTPEWTK DKEPLQALKRFGKKLAEIEEKIMKMNNDTKLKNRIGPVKMPYTLLYPTSEPGLTGKGIPN SVSI

Transcript Sequence

Gene sequence data has not been registered.